Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEX264Testis expressed 264, ER-phagy receptor. (314 aa)    
Predicted Functional Partners:
CCPG1
Cell cycle progression 1.
     
 0.935
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.873
ATL3
Atlastin GTPase 3.
      
 0.829
TMEM79
Transmembrane protein 79.
    
   0.811
RTN3
Reticulon.
      
 0.791
RETREG2
Reticulophagy regulator family member 2.
      
 0.768
CALCOCO1
Calcium binding and coiled-coil domain 1.
      
 0.757
RETREG3
Reticulophagy regulator family member 3.
      
 0.703
ZNF428
Zinc finger protein 428.
      
 0.675
GABARAP
GABA type A receptor-associated protein.
    
 
 0.671
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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