Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHIP00000001084Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
E2F6
E2F transcription factor 6.
   
 0.840
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.835
PCGF6
Polycomb group ring finger 6.
   
 0.832
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.797
CBX5
Chromobox 5.
   
 
 0.795
TRIM28
Tripartite motif containing 28.
    
 0.765
CHD4
Uncharacterized protein.
   
 0.721
RING1
Ring finger protein 1.
    
 0.713
POGZ
Pogo transposable element derived with ZNF domain.
    
 0.704
CHAF1A
Chromatin assembly factor 1 subunit A.
   
 
 0.697
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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