Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)    
Predicted Functional Partners:
ENSCHIP00000019526
Uncharacterized protein.
   
 0.987
RPL8
Ribosomal_L2_C domain-containing protein.
   
 0.985
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.978
ENSCHIP00000002433
Uncharacterized protein.
   
 0.971
ENSCHIP00000003756
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
ENSCHIP00000011744
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
ENSCHIP00000016829
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
ENSCHIP00000017727
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
RPL37
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.967
ENSCHIP00000013492
Uncharacterized protein.
   
 0.967
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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