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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCO4Single-pass membrane protein with coiled-coil domains 4. (59 aa)    
Predicted Functional Partners:
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.693
LONRF1
LON peptidase N-terminal domain and ring finger 1.
      
 0.658
NAP1L3
Nucleosome assembly protein 1 like 3; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.657
NTAN1
Uncharacterized protein.
      
 0.621
NTAN1-2
Uncharacterized protein.
      
 0.621
ACOT13
4HBT domain-containing protein.
      
 0.619
TMEM230
Uncharacterized protein.
      
 0.618
GLT8D2
Glycosyltransferase 8 domain containing 2.
      
 0.614
GTF2H5
General transcription factor IIH subunit 5.
      
 0.613
EML1
EMAP like 1.
      
 0.611
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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