Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMCO4Single-pass membrane protein with coiled-coil domains 4. (59 aa)    
Predicted Functional Partners:
LONRF1
LON peptidase N-terminal domain and ring finger 1.
      
 0.635
NAP1L3
Nucleosome assembly protein 1 like 3; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.635
NTAN1
Uncharacterized protein.
      
 0.634
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.634
ACOT13
4HBT domain-containing protein.
      
 0.634
NTAN1-2
Uncharacterized protein.
      
 0.634
TMEM230
Uncharacterized protein.
      
 0.633
VSTM5
V-set and transmembrane domain containing 5.
      
 0.577
B3GALNT1
Hexosyltransferase.
      
 0.568
GTF2H5
General transcription factor IIH subunit 5.
      
 0.563
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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