STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102174738Uncharacterized protein; Belongs to the SKP1 family. (163 aa)    
Predicted Functional Partners:
CUL1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.991
RBX1
RING-type domain-containing protein.
   
 0.981
FBXW11
F-box and WD repeat domain containing 11.
    
 0.956
CUL7
Cullin 7; Belongs to the cullin family.
   
 0.955
LOC102188771
Zf-rbx1 domain-containing protein.
   
 0.953
SKP2
F-box domain-containing protein.
    
 0.945
FBXW8
F-box and WD repeat domain containing 8.
    
 0.932
CACYBP
Calcyclin binding protein.
   
 0.931
FBXL5
F-box and leucine rich repeat protein 5.
    
 0.930
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.930
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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