HNRNPA0 protein (Capra hircus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Capra hircus

NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP17A	HNRNPA0	ENSCHIP00000000613	ENSCHIP00000001329	A-kinase anchoring protein 17A.	Heterogeneous nuclear ribonucleoprotein A0.	0.662
AKAP17A	HNRNPUL2	ENSCHIP00000000613	ENSCHIP00000022152	A-kinase anchoring protein 17A.	Uncharacterized protein.	0.476
AKAP17A	SRSF2	ENSCHIP00000000613	ENSCHIP00000016931	A-kinase anchoring protein 17A.	RRM domain-containing protein.	0.572
DDX5	HNRNPA0	ENSCHIP00000008777	ENSCHIP00000001329	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein A0.	0.722
DDX5	HNRNPK	ENSCHIP00000008777	ENSCHIP00000013366	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.901
DDX5	HNRNPL	ENSCHIP00000008777	ENSCHIP00000023891	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.781
DDX5	HNRNPM	ENSCHIP00000008777	ENSCHIP00000032304	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein M.	0.933
DDX5	HNRNPU	ENSCHIP00000008777	ENSCHIP00000002234	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein U.	0.928
DDX5	HNRNPUL1	ENSCHIP00000008777	ENSCHIP00000013949	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.708
DDX5	HNRNPUL2	ENSCHIP00000008777	ENSCHIP00000022152	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.742
DDX5	PTBP1	ENSCHIP00000008777	ENSCHIP00000018918	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	Polypyrimidine tract binding protein 1.	0.497
DDX5	SRSF2	ENSCHIP00000008777	ENSCHIP00000016931	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	RRM domain-containing protein.	0.523
HNRNPA0	AKAP17A	ENSCHIP00000001329	ENSCHIP00000000613	Heterogeneous nuclear ribonucleoprotein A0.	A-kinase anchoring protein 17A.	0.662
HNRNPA0	DDX5	ENSCHIP00000001329	ENSCHIP00000008777	Heterogeneous nuclear ribonucleoprotein A0.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.722
HNRNPA0	HNRNPK	ENSCHIP00000001329	ENSCHIP00000013366	Heterogeneous nuclear ribonucleoprotein A0.	Uncharacterized protein.	0.721
HNRNPA0	HNRNPL	ENSCHIP00000001329	ENSCHIP00000023891	Heterogeneous nuclear ribonucleoprotein A0.	Uncharacterized protein.	0.669
HNRNPA0	HNRNPM	ENSCHIP00000001329	ENSCHIP00000032304	Heterogeneous nuclear ribonucleoprotein A0.	Heterogeneous nuclear ribonucleoprotein M.	0.890
HNRNPA0	HNRNPU	ENSCHIP00000001329	ENSCHIP00000002234	Heterogeneous nuclear ribonucleoprotein A0.	Heterogeneous nuclear ribonucleoprotein U.	0.901
HNRNPA0	HNRNPUL1	ENSCHIP00000001329	ENSCHIP00000013949	Heterogeneous nuclear ribonucleoprotein A0.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.701
HNRNPA0	HNRNPUL2	ENSCHIP00000001329	ENSCHIP00000022152	Heterogeneous nuclear ribonucleoprotein A0.	Uncharacterized protein.	0.711