Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRPK3SRSF protein kinase 3. (565 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
    
 0.865
SRSF2
RRM domain-containing protein.
   
 0.830
SRSF5
Serine and arginine rich splicing factor 5.
    
 0.818
ENSCHIP00000021560
RRM domain-containing protein.
    
 0.806
SRSF9
Serine and arginine rich splicing factor 9.
    
 0.805
ENSCHIP00000005003
Uncharacterized protein.
    
 0.751
SRSF6
Uncharacterized protein.
    
 0.751
SRSF4
Serine and arginine rich splicing factor 4.
    
 0.751
SRSF3
RRM domain-containing protein.
    
 0.709
SRSF7
Serine and arginine rich splicing factor 7.
    
 0.704
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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