Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN2Leucine rich repeat and fibronectin type III domain containing 2. (787 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 0.928
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
   
 0.878
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.725
ENSCHIP00000005724
Uncharacterized protein.
   
 0.716
DLG1
Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.
   
 0.716
DLG2
Discs large MAGUK scaffold protein 2.
   
 0.716
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
   
 0.664
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
 0.652
ENSCHIP00000024754
L27_1 domain-containing protein.
   
 0.639
KCNT2
Potassium sodium-activated channel subfamily T member 2.
    
 
 0.629
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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