Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCER1Coiled-coil glutamate rich protein 1. (403 aa)    
Predicted Functional Partners:
SPATA46
Spermatogenesis associated 46.
   
    0.983
TEX33
Testis expressed 33.
   
  
 0.914
MORN5
MORN repeat containing 5.
    
 
 0.839
FAM71A
Family with sequence similarity 71 member A.
   
  
 0.808
PEBP4
Phosphatidylethanolamine binding protein 4.
   
  
 0.781
MORN3
MORN repeat containing 3.
    
 
 0.724
FAM71B
Family with sequence similarity 71 member B.
   
  
 0.722
MORN1
MORN repeat containing 1.
    
 
 0.550
ROPN1
Uncharacterized protein.
    
 
 0.514
ADAM2
ADAM metallopeptidase domain 2.
   
 
 0.457
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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