Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIN9Lin-9 DREAM MuvB core complex component. (558 aa)    
Predicted Functional Partners:
LIN37
Lin-37 DREAM MuvB core complex component.
    
 0.999
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.999
MYBL2
MYB proto-oncogene like 2.
    
 0.998
LIN54
Lin-54 DREAM MuvB core complex component.
   
 0.995
E2F4
E2F transcription factor 4.
    
 0.991
RBL2
RB transcriptional corepressor like 2.
   
 0.986
RBL1
RB transcriptional corepressor like 1.
   
 0.979
FOXM1
Fork-head domain-containing protein.
    
 0.979
MYBL1
MYB proto-oncogene like 1.
    
 0.976
ENSCHIP00000024631
Uncharacterized protein.
   
 0.975
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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