Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RABEPKRab9 effector protein with kelch motifs. (372 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
     
 0.929
PLIN3
Perilipin; Belongs to the perilipin family.
    
 0.823
MYRIP
Myosin VIIA and Rab interacting protein.
      
 0.756
DOC2A
Double C2-like domain-containing protein.
      
 0.747
XPNPEP1
X-prolyl aminopeptidase 1; Belongs to the peptidase M24B family.
   
  
 0.746
STX8
Syntaxin 8.
     
 0.696
IQCB1
IQ motif containing B1.
    
 0.684
VAMP1
Vesicle associated membrane protein 1.
     
 0.658
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.628
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.622
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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