Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102175291Ribosomal_L7Ae domain-containing protein. (115 aa)    
Predicted Functional Partners:
RPL8
Ribosomal_L2_C domain-containing protein.
   
 0.957
ENSCHIP00000019526
Uncharacterized protein.
   
 0.945
ENSCHIP00000009310
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.944
LOC102179258
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.943
ENSCHIP00000002433
Uncharacterized protein.
   
 0.941
LOC102180594
Ribosomal_L16 domain-containing protein.
   
 0.936
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.929
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.923
ENSCHIP00000002094
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.921
ENSCHIP00000002248
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.921
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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