Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM54Transmembrane protein 54. (226 aa)    
Predicted Functional Partners:
BCO1
Beta-carotene oxygenase 1.
     
 0.799
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.755
TSPYL5
TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.718
STARD10
StAR related lipid transfer domain containing 10.
      
 0.688
DLG5
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
    
 0.678
ZNF518B
Zinc finger protein 518B.
    
 0.668
TMEM126B
Transmembrane protein 126B.
      
 0.658
SERF2
Small EDRK-rich factor 2; Positive regulator of amyloid protein aggregation and proteotoxicity (By similarity). Induces conformational changes in amyloid proteins, such as HTT, driving them into compact formations preceding the formation of aggregates (By similarity).
      
 0.658
TMEM134
Transmembrane protein 134.
      
 0.635
LYG1
Lysozyme g1.
      
 0.633
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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