STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMBOX1Homeobox containing 1. (420 aa)    
Predicted Functional Partners:
FAM160B2
Family with sequence similarity 160 member B2.
   
  
 0.677
PHTF2
Putative homeodomain transcription factor 2.
      
 0.611
ZNF41
Zinc finger protein 41.
    
 
 0.583
ZBTB26
Zinc finger and BTB domain containing 26.
    
 
 0.582
ZNF518B
Zinc finger protein 518B.
    
 
 0.541
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
      
 0.540
SERPINB8
Serpin family B member 8; Belongs to the serpin family.
    
 
 0.499
DYRK4
Dual specificity tyrosine phosphorylation regulated kinase 4.
   
 
 0.463
PKNOX2
PBX/knotted 1 homeobox 2.
    
 
 0.457
ZNF484
Zinc finger protein 484.
    
 
 0.452
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.