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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCNASprT-like domain-containing protein. (431 aa)    
Predicted Functional Partners:
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.768
SPRTN
SprT-like N-terminal domain.
   
  
 0.701
LOC106503984
Uncharacterized protein.
      
 0.639
STRA8
Stimulated by retinoic acid 8.
      
 0.619
DAZL
RRM domain-containing protein.
    
 
 0.612
PUM2
Pumilio RNA binding family member 2.
      
 0.599
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
  
 0.555
PRDM14
PR/SET domain 14.
    
 
 0.534
POLR1E
RNA polymerase I subunit E.
     
 0.520
ENSCHIP00000002058
Uncharacterized protein.
    
 0.517
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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