Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRM3Protamine 3. (91 aa)    
Predicted Functional Partners:
TNP1
Transition protein 1.
   
  
 0.853
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
   
  
 0.811
PRM2
Uncharacterized protein.
   
  
 0.804
SPATA25
Spermatogenesis associated 25.
      
 0.766
CATSPER3
Cation channel sperm associated 3.
      
 0.764
TNP2
Nuclear transition protein 2; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction.
   
  
 0.737
ACRV1
Acrosomal vesicle protein 1.
   
  
 0.723
IZUMO2
KRAB domain-containing protein.
   
  
 0.719
SPACA4
Sperm acrosome associated 4.
      
 0.658
IZUMO3
IZUMO family member 3.
   
  
 0.656
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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