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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD7PDZ domain containing 7. (1008 aa)    
Predicted Functional Partners:
USH2A
Uncharacterized protein.
    
 
 0.915
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 
 0.914
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.834
USH1G
USH1 protein network component sans.
    
 0.798
CLRN1
Clarin 1.
      
 0.768
TMC1
Transmembrane channel-like protein.
    
 
 0.762
FCHSD2
FCH and double SH3 domains 2.
    
   0.744
STRC
Stereocilin.
    
 
 0.736
PCDH15
Protocadherin related 15.
    
 
 0.733
CDH23
Cadherin related 23.
    
 
 0.729
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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