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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBEAL1Neurobeachin like 1. (2712 aa)    
Predicted Functional Partners:
FAM117B
Family with sequence similarity 117 member B.
      
 0.810
ICA1L
Islet cell autoantigen 1 like.
      
 0.781
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.753
ZYG11A
Zyg-11 family member A, cell cycle regulator.
      
 0.750
VPS13D
Vacuolar protein sorting 13 homolog D.
   
  
 0.743
PAQR3
Progestin and adipoQ receptor family member 3.
   
  
 0.725
ZNF142
Uncharacterized protein.
      
 0.720
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.686
ZC3H8
Zinc finger CCCH-type containing 8.
    
 
 0.685
TEX13B
RanBP2-type domain-containing protein.
      
 0.679
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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