Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX30Sorting nexin family member 30. (437 aa)    
Predicted Functional Partners:
SNX4
Sorting nexin 4.
  
0.939
SNX6
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.819
SNX8
Sorting nexin 8.
   
 
 0.806
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
   
 
 0.734
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.667
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.660
SNX5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
0.638
FKBP15
Peptidylprolyl isomerase.
      
 0.576
GAK
Cyclin G associated kinase.
   
 0.575
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
    
 0.571
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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