Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIPPLY3Ripply transcriptional repressor 3. (178 aa)    
Predicted Functional Partners:
ENSCHIP00000000383
Uncharacterized protein.
    
 
 0.736
TIFA
TRAF interacting protein with forkhead associated domain.
    
   0.652
IRX1
Iroquois homeobox 1.
      
 0.550
CD6
CD6 molecule.
      
 0.537
PAX9
Paired box 9.
      
 0.520
INSM1
INSM transcriptional repressor 1.
      
 0.519
NKX2-5
NK2 homeobox 5.
      
 0.478
FGF10
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.456
TBX5
T-box transcription factor 5.
      
 0.456
EP300
E1A binding protein p300.
   
  
 0.454
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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