Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF9TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (252 aa)    
Predicted Functional Partners:
TNFRSF9
TNF receptor superfamily member 9.
    
 0.997
CD70
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
  
 0.849
TNFSF4
TNF superfamily member 4; Belongs to the tumor necrosis factor family.
      
 0.749
TNFRSF4
TNF receptor superfamily member 4.
      
 0.698
TNFSF18
TNF superfamily member 18.
      
 0.697
TNFSF14
TNF_2 domain-containing protein.
      
 0.676
HHLA2
HERV-H LTR-associating 2.
  
   
 0.660
CD276
CD276 molecule.
      
 0.651
CD80
CD80 molecule.
      
 0.613
TNFSF8
TNF superfamily member 8; Belongs to the tumor necrosis factor family.
    
 
 0.598
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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