Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR13Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.697
NBL1
NBL1, DAN family BMP antagonist.
      
 0.660
EDEM2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.658
ACTRT1
Actin related protein T1; Belongs to the actin family.
   
 0.655
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.650
PBRM1
Polybromo 1.
   
 0.638
SNX16
Sorting nexin 16.
      
 0.637
EXD2
Exonuclease 3'-5' domain containing 2.
      
 0.637
SPATA18
Spermatogenesis associated 18.
      
 0.634
LGALS3
Galectin.
   
 
 0.604
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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