STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOMApolipoprotein M. (189 aa)    
Predicted Functional Partners:
APOH
Apolipoprotein H.
   
 
 0.890
APOA2
Apolipoprotein A2.
   
 
 0.876
APOB
Apolipoprotein B.
   
 
 0.818
PON1
Paraoxonase 1.
   
 
 0.790
APOE
Apolipoprotein E.
     
 0.778
APOC3
Apolipoprotein C3.
   
 
 0.763
PLTP
Phospholipid transfer protein.
     
 0.710
AHSG
Alpha 2-HS glycoprotein.
   
  
 0.709
SPP2
Secreted phosphoprotein 2.
   
  
 0.700
APOA5
Apolipoprotein A5.
   
 
 0.689
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.