STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL10A1Collagen type X alpha 1 chain. (674 aa)    
Predicted Functional Partners:
ACAN
Aggrecan.
   
 0.896
COL4A6
Collagen IV NC1 domain-containing protein.
 
  
 0.895
RUNX2
RUNX family transcription factor 2.
     
 0.876
MMP13
Matrix metallopeptidase 13.
   
 0.866
SOX9
SRY-box transcription factor 9.
   
 
 0.859
IHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.819
ALPL
Alkaline phosphatase.
      
 0.779
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.731
COMP
Cartilage oligomeric matrix protein.
   
 0.726
BGLAP
Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium.
      
 0.720
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.