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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC134Coiled-coil domain containing 134. (229 aa)    
Predicted Functional Partners:
SGMS2
Sphingomyelin synthase 2.
      
 0.832
LOC102190786
NUT domain-containing protein.
    
 
 0.782
MCRIP1
Uncharacterized protein.
      
 0.771
XPO1
Exportin 1.
    
 0.697
TMEM38B
Transmembrane protein 38B.
      
 0.692
FBXW5
F-box and WD repeat domain containing 5.
   
  
 0.680
BTN2A2
Butyrophilin subfamily 2 member A2.
    
 0.672
ZBTB20
Zinc finger and BTB domain containing 20.
    
 0.661
TAPT1
Transmembrane anterior posterior transformation 1.
      
 0.658
FKBP10
Peptidylprolyl isomerase.
    
 0.628
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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