STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOR4ATorsin family 4 member A. (406 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 
 0.780
C20orf27
Chromosome 20 open reading frame 27.
      
 0.764
SUMF1
Sulfatase modifying factor 1.
      
 0.756
SPART
Spartin.
      
 0.734
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
      
 0.713
TCAF1
TRPM8 channel associated factor 1.
      
 0.651
PDLIM2
Uncharacterized protein.
      
 0.622
POLR3G
Uncharacterized protein.
      
 0.618
BRK1
Uncharacterized protein.
      
 0.611
PSMF1
Proteasome inhibitor subunit 1.
      
 0.590
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.