STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOVA2NOVA alternative splicing regulator 2. (550 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
    
 
 0.747
RBFOX1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
      
 0.736
DCC
DCC netrin 1 receptor.
      
 0.703
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.699
KHDC4
KH domain containing 4, pre-mRNA splicing factor.
      
 0.653
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
      
 0.602
RBM38
RNA binding motif protein 38.
      
 0.568
DAZAP1
DAZ associated protein 1.
   
 
 0.559
CCDC84
Coiled-coil domain containing 84.
      
 0.557
CELF2
CUGBP Elav-like family member 2.
    
 
 0.551
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.