STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC58Coiled-coil domain containing 58. (144 aa)    
Predicted Functional Partners:
TIMM9
Translocase of inner mitochondrial membrane 9.
   
  
 0.873
VBP1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
    0.803
ISCA2
Iron-sulfur cluster assembly 2.
   
  
 0.799
ATP5PF
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
   
  
 0.781
TIMM13
Translocase of inner mitochondrial membrane 13; Belongs to the small Tim family.
      
 0.750
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B; Belongs to the small Tim family.
   
  
 0.724
DNAJC19
DnaJ heat shock protein family (Hsp40) member C19.
   
 
 0.724
LOC108636844
ZnF_CDGSH domain-containing protein.
   
  
 0.706
MRPL35
Mitochondrial ribosomal protein L35.
   
    0.706
MRPL30
Ribosomal_L30 domain-containing protein.
   
    0.703
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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