STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC36A1Solute carrier family 36 member 1. (476 aa)    
Predicted Functional Partners:
SLC6A20
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.679
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
     
 0.668
CARNS1
ATP-grasp domain-containing protein.
      
 0.661
EFHB
EF-hand domain family member B.
      
 0.658
SLC38A1
Solute carrier family 38 member 1.
    
 
 0.657
SLC1A1
Amino acid transporter.
    
 
 0.639
SLC45A2
Solute carrier family 45 member 2.
   
  
 0.637
SLC38A9
Solute carrier family 38 member 9.
    
 
 0.627
FAT2
FAT atypical cadherin 2.
      
 0.626
SLC6A14
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.625
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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