STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL40Kelch like family member 40. (596 aa)    
Predicted Functional Partners:
KBTBD13
Kelch repeat and BTB domain containing 13.
   
 0.917
LMOD3
Leiomodin 3.
   
 
 0.880
ARMC12
Armadillo repeat containing 12.
      
 0.862
BBS1
BBS1 domain-containing protein.
    
 0.862
BBS4
Bardet-Biedl syndrome 4.
    
 0.844
NEB
Nebulin.
   
 
 0.839
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.833
TTC8
Tetratricopeptide repeat domain 8.
   
 0.829
BBS2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.822
MYPN
Myopalladin.
   
 
 0.795
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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