STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf50Chromosome 12 open reading frame 50. (399 aa)    
Predicted Functional Partners:
C12orf29
Chromosome 12 open reading frame 29.
      
 0.847
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.833
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
      
 0.715
KRBA2
KRAB-A domain containing 2.
   
  
 0.703
MAP3K19
Mitogen-activated protein kinase kinase kinase 19.
      
 0.658
THSD7B
Thrombospondin type 1 domain containing 7B.
      
 0.656
POLDIP3
DNA polymerase delta interacting protein 3.
     
 0.620
TMEM104
Transmembrane protein 104.
      
 0.616
SARNP
SAP domain containing ribonucleoprotein.
    
 0.583
ENSCHIP00000017731
SAP domain-containing protein.
    
 0.583
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.