STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHIP00000017122Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
MRPS18A
Mitochondrial ribosomal protein S18A.
   
  
 0.813
SFMBT2
Scm like with four mbt domains 2.
   
  
 0.753
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.720
ZNF609
Zinc finger protein 609.
      
 0.720
ITCH
E3 ubiquitin-protein ligase.
      
 0.564
FANCM
FA complementation group M.
   
 0.534
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.524
LOC102176643
Tudor domain-containing protein.
    
 0.482
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.464
POLD1
DNA polymerase.
   
 0.461
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.