STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BANK1B cell scaffold protein with ankyrin repeats 1. (771 aa)    
Predicted Functional Partners:
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.667
LYN
Tyrosine-protein kinase.
   
 0.665
PTPN22
Protein tyrosine phosphatase non-receptor type 22.
   
 
 0.594
LRRC18
Leucine rich repeat containing 18.
      
 0.553
MS4A1
Membrane spanning 4-domains A1.
   
 
 0.542
WDFY4
DUF4704 domain-containing protein.
   
  
 0.542
SLC9B1
Solute carrier family 9 member B1.
      
 0.540
NXF3
NTF2 domain-containing protein.
      
 0.540
TBC1D9
TBC1 domain family member 9.
      
 0.527
CD22
CD22 molecule.
   
 0.526
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.