STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC8B1Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (561 aa)    
Predicted Functional Partners:
TPCN1
Two pore segment channel 1.
   
  
 0.754
NUDT3
Nudix hydrolase 3.
      
 0.703
SLC18B1
Solute carrier family 18 member B1.
      
 0.692
CCDC34
Coiled-coil domain containing 34.
   
 
 0.665
KCTD1
BTB domain-containing protein.
      
 0.659
METTL9
Methyltransferase like 9.
      
 0.658
TPRA1
Transmembrane protein adipocyte associated 1.
   
  
 0.658
NDUFAF7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
      
 0.613
MICU1
Mitochondrial calcium uptake 1.
      
 0.610
SLC39A10
Solute carrier family 39 member 10.
   
  
 0.593
Your Current Organism:
Capra hircus
NCBI taxonomy Id: 9925
Other names: African dwarf goat, African dwarf goats, C. hircus, Capra aegagrus hircus, domestic goat, goat, goats
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