Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX18 | EBNA1BP2 | ENSCHIP00000020719 | ENSCHIP00000025179 | RNA helicase. | EBNA1 binding protein 2. | 0.979 |
DDX18 | FTSJ3 | ENSCHIP00000020719 | ENSCHIP00000031296 | RNA helicase. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.984 |
DDX18 | GNL3 | ENSCHIP00000020719 | ENSCHIP00000025382 | RNA helicase. | G protein nucleolar 3. | 0.992 |
DDX18 | NIFK | ENSCHIP00000020719 | ENSCHIP00000006791 | RNA helicase. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.994 |
DDX18 | NOC2L | ENSCHIP00000020719 | ENSCHIP00000017276 | RNA helicase. | NOC2 like nucleolar associated transcriptional repressor. | 0.989 |
DDX18 | NOP53 | ENSCHIP00000020719 | ENSCHIP00000005308 | RNA helicase. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.620 |
DDX18 | NOP58 | ENSCHIP00000020719 | ENSCHIP00000030160 | RNA helicase. | NOP58 ribonucleoprotein. | 0.975 |
DDX18 | NSUN6 | ENSCHIP00000020719 | ENSCHIP00000009922 | RNA helicase. | NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.971 |
DDX18 | PES1 | ENSCHIP00000020719 | ENSCHIP00000014971 | RNA helicase. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.993 |
DDX18 | RSL24D1 | ENSCHIP00000020719 | ENSCHIP00000015957 | RNA helicase. | Ribosomal L24 domain containing 1. | 0.965 |
EBNA1BP2 | DDX18 | ENSCHIP00000025179 | ENSCHIP00000020719 | EBNA1 binding protein 2. | RNA helicase. | 0.979 |
EBNA1BP2 | FTSJ3 | ENSCHIP00000025179 | ENSCHIP00000031296 | EBNA1 binding protein 2. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.983 |
EBNA1BP2 | GNL3 | ENSCHIP00000025179 | ENSCHIP00000025382 | EBNA1 binding protein 2. | G protein nucleolar 3. | 0.993 |
EBNA1BP2 | NIFK | ENSCHIP00000025179 | ENSCHIP00000006791 | EBNA1 binding protein 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.996 |
EBNA1BP2 | NOC2L | ENSCHIP00000025179 | ENSCHIP00000017276 | EBNA1 binding protein 2. | NOC2 like nucleolar associated transcriptional repressor. | 0.989 |
EBNA1BP2 | NOP53 | ENSCHIP00000025179 | ENSCHIP00000005308 | EBNA1 binding protein 2. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.923 |
EBNA1BP2 | NOP58 | ENSCHIP00000025179 | ENSCHIP00000030160 | EBNA1 binding protein 2. | NOP58 ribonucleoprotein. | 0.959 |
EBNA1BP2 | NSUN6 | ENSCHIP00000025179 | ENSCHIP00000009922 | EBNA1 binding protein 2. | NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.970 |
EBNA1BP2 | PES1 | ENSCHIP00000025179 | ENSCHIP00000014971 | EBNA1 binding protein 2. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.996 |
EBNA1BP2 | RSL24D1 | ENSCHIP00000025179 | ENSCHIP00000015957 | EBNA1 binding protein 2. | Ribosomal L24 domain containing 1. | 0.977 |
page 1 of 6