STM0018 protein (Salmonella enterica Typhimurium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

STM0018

Putative exochitinase. (699 aa)

Predicted Functional Partners:

STM0233

0.993

STM0016

0.971

STM0014

0.966

STM0017

0.929

STM0041

0.910

STM0015

0.898

STM0029

0.897

STM0031

0.897

STM0019

0.893

yicL

0.755

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
STM0014	STM0015	STM0014	STM0015	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative bacteriophage protein.	0.975
STM0014	STM0016	STM0014	STM0016	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein.	0.971
STM0014	STM0017	STM0014	STM0017	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Similar to E. coli putative sensory transducer (AAC75886.1); Blastp hit to AAC75886.1 (269 aa), 30% identity in aa 3 - 109.	0.950
STM0014	STM0018	STM0014	STM0018	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative exochitinase.	0.966
STM0014	STM0029	STM0014	STM0029	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative transcriptional regulator MarT (gi\|4324612).	0.952
STM0014	STM0031	STM0014	STM0031	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative transcriptional regulator MarT (gi\|4324612).	0.952
STM0014	STM0233	STM0014	STM0233	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	Putative endochitinase.	0.418
STM0015	STM0014	STM0015	STM0014	Putative bacteriophage protein.	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	0.975
STM0015	STM0016	STM0015	STM0016	Putative bacteriophage protein.	Hypothetical protein.	0.959
STM0015	STM0017	STM0015	STM0017	Putative bacteriophage protein.	Similar to E. coli putative sensory transducer (AAC75886.1); Blastp hit to AAC75886.1 (269 aa), 30% identity in aa 3 - 109.	0.954
STM0015	STM0018	STM0015	STM0018	Putative bacteriophage protein.	Putative exochitinase.	0.898
STM0015	STM0029	STM0015	STM0029	Putative bacteriophage protein.	Putative transcriptional regulator MarT (gi\|4324612).	0.952
STM0015	STM0031	STM0015	STM0031	Putative bacteriophage protein.	Putative transcriptional regulator MarT (gi\|4324612).	0.952
STM0016	STM0014	STM0016	STM0014	Hypothetical protein.	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	0.971
STM0016	STM0015	STM0016	STM0015	Hypothetical protein.	Putative bacteriophage protein.	0.959
STM0016	STM0017	STM0016	STM0017	Hypothetical protein.	Similar to E. coli putative sensory transducer (AAC75886.1); Blastp hit to AAC75886.1 (269 aa), 30% identity in aa 3 - 109.	0.988
STM0016	STM0018	STM0016	STM0018	Hypothetical protein.	Putative exochitinase.	0.971
STM0016	STM0029	STM0016	STM0029	Hypothetical protein.	Putative transcriptional regulator MarT (gi\|4324612).	0.952
STM0016	STM0031	STM0016	STM0031	Hypothetical protein.	Putative transcriptional regulator MarT (gi\|4324612).	0.953
STM0017	STM0014	STM0017	STM0014	Similar to E. coli putative sensory transducer (AAC75886.1); Blastp hit to AAC75886.1 (269 aa), 30% identity in aa 3 - 109.	Similar to E. coli putative transcriptional regulator LYSR-type (AAC73704.1); Blastp hit to AAC73704.1 (300 aa), 25% identity in aa 8 - 296; Belongs to the LysR transcriptional regulatory family.	0.950

page 1 of 3

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About