Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
stfGPutative adhesin; minor fimbrial subunit StfG (gi|3747034). (176 aa)    
Predicted Functional Partners:
bcfC
Fimbrial usher; Bovine colonization factor BcfC (gi|4530570).
  
 
 0.916
stfC
Outer membrane usher protein StfC (gi|3747030).
  
   0.907
bcfA
Fimbrial subunit (gi|4959511).
  
  
 0.900
stfD
Periplasmic fimbrial chaperone StfD (gi|3747031).
  
 
 0.889
stfE
Minor fimbrial subunit StfE (gi|3747032).
  
  
 0.817
stfF
Minor fimbrial subunit StfF (gi|3747033).
  
  
 0.810
yadU
Putative outer membrane protein; Hypothetical 30.2 da protein in stfG 3'region precursor. (SW:YADU_SALTY); To E.coli YfcO.
  
  
 0.793
stfA
Major fimbrial subunit StfA (gi|3747029).
  
    0.584
lpfC
Long polar fimbrial outer membrane usher protein; Involved in the export and assembly of LpfA fimbrial subunits across the outer membrane; Belongs to the fimbrial export usher family.
  
   0.521
bcfB
Fimbrial chaperone (gi|4959512).
  
 
 0.475
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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