Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
STM0279Putative cytoplasmic protein. (161 aa)    
Predicted Functional Partners:
STM0282
Similar to E. coli putative outer membrane protein (AAC76576.1); Blastp hit to AAC76576.1 (219 aa), 44% identity in aa 145 - 214.
 
  
 0.953
STM0274
Putative cytoplasmic protein.
 
 
 0.926
STM0276
Putative cytoplasmic protein.
 
  
0.926
STM0273
Putative cytoplasmic protein.
 
 
 0.924
STM0281
Putative cytoplasmic protein.
 
  
 0.924
STM0280
Putative outer membrane lipoprotein.
 
  
 0.923
STM3131
Putative cytoplasmic protein.
  
 
 
0.922
STM0285
Putative inner membrane protein.
 
  
 0.875
STM0269
Putative cytoplasmic protein.
 
  
 0.872
STM0270
Putative cytoplasmic protein.
 
    0.864
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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