crl protein (Salmonella enterica Typhimurium)

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crl

Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis. (133 aa)

Predicted Functional Partners:

rpoS

0.917

yafA

0.872

STM1538

0.547

gpt

0.532

STM3768

0.494

phnR

0.451

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
STM1538	crl	STM1538	STM0319	Similar to E. coli hydrogenase-1 large subunit (AAC74058.1); Blastp hit to AAC74058.1 (597 aa), 66% identity in aa 1 - 597.	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.547
STM3768	crl	STM3768	STM0319	Putative selenocysteine synthase (L-seryl-tRNA(Ser) selenium transferase).	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.494
crl	STM1538	STM0319	STM1538	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	Similar to E. coli hydrogenase-1 large subunit (AAC74058.1); Blastp hit to AAC74058.1 (597 aa), 66% identity in aa 1 - 597.	0.547
crl	STM3768	STM0319	STM3768	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	Putative selenocysteine synthase (L-seryl-tRNA(Ser) selenium transferase).	0.494
crl	gpt	STM0319	STM0317	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	Guanine-hypoxanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.	0.532
crl	phnR	STM0319	STM0430	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	2-aminoethylphosphonate transport, repressor; Probable repressor protein of GntR family phnR (gi\|11354257).	0.451
crl	rpoS	STM0319	STM2924	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	Sigma S (sigma 38) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.	0.917
crl	yafA	STM0319	STM0318	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	Putative hydrolase of the alpha/beta superfamily; Displays esterase activity toward pNP-butyrate.	0.872
gpt	crl	STM0317	STM0319	Guanine-hypoxanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.532
gpt	yafA	STM0317	STM0318	Guanine-hypoxanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.	Putative hydrolase of the alpha/beta superfamily; Displays esterase activity toward pNP-butyrate.	0.568
phnR	crl	STM0430	STM0319	2-aminoethylphosphonate transport, repressor; Probable repressor protein of GntR family phnR (gi\|11354257).	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.451
rpoS	crl	STM2924	STM0319	Sigma S (sigma 38) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.917
yafA	crl	STM0318	STM0319	Putative hydrolase of the alpha/beta superfamily; Displays esterase activity toward pNP-butyrate.	Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes, such as the csgBAC operon encoding the subunits of curli proteins, and BcsA, involved in cellulose biosynthesis.	0.872
yafA	gpt	STM0318	STM0317	Putative hydrolase of the alpha/beta superfamily; Displays esterase activity toward pNP-butyrate.	Guanine-hypoxanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.	0.568

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