STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yajRPutative MFS family transporter; Similar to E. coli putative transport protein (AAC73530.1); Blastp hit to AAC73530.1 (456 aa), 89% identity in aa 8 - 453. (449 aa)    
Predicted Functional Partners:
narU
MFS superfamily nitrate extrusion protein; Catalyzes nitrate uptake, nitrite uptake and nitrite export across the cytoplasmic membrane; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
      
 0.715
yhgN
Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC76459.1); Blastp hit to AAC76459.1 (197 aa), 72% identity in aa 4 - 39.
      
 0.700
ybfE
LexA regulated, putative SOS response; Similar to E. coli orf, hypothetical protein (AAC73779.1); Blastp hit to AAC73779.1 (120 aa), 90% identity in aa 24 - 120.
  
   
 0.659
fsr
Putative MFS family of transport protein; Similar to E. coli fosmidomycin resistance protein (AAC73581.1); Blastp hit to AAC73581.1 (406 aa), 93% identity in aa 1 - 405.
   
  
 0.650
mdfA
Multidrug translocase; Similar to E. coli proton motive force efflux pump (AAC73929.1); Blastp hit to AAC73929.1 (410 aa), 90% identity in aa 1 - 406.
   
  
 0.647
ychE
Putative MarC family integral membrane protein; Similar to E. coli putative channel protein (AAC74324.1); Blastp hit to AAC74324.1 (215 aa), 93% identity in aa 1 - 215.
   
  
 0.638
yqhA
Putative membrane-associated protein; Similar to E. coli orf, hypothetical protein (AAC76038.1); Blastp hit to AAC76038.1 (164 aa), 94% identity in aa 1 - 164.
   
  
 0.616
ydiK
Putative permease; Similar to E. coli orf, hypothetical protein (AAC74758.1); Blastp hit to AAC74758.1 (370 aa), 89% identity in aa 1 - 370.
      
 0.548
pitA
PiT family; similar to E. coli low-affinity phosphate transport (AAC76518.1); Blastp hit to AAC76518.1 (499 aa), 92% identity in aa 1 - 499.
      
 0.524
sdhD
Succinate dehydrogenase, hydrophobic subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
   
 0.505
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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