ybdJ protein (Salmonella enterica Typhimurium)

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ybdJ

Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82. (82 aa)

Predicted Functional Partners:

ybdK

0.886

ybdF

0.852

ynaJ

0.754

ybaM

0.747

yniB

0.726

ydbL

0.726

ydhK

0.723

ligT

0.722

yfjD

0.680

ynfA

0.649

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ligT	ybdF	STM0188	STM0579	2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73680.1); Blastp hit to AAC73680.1 (122 aa), 75% identity in aa 1 - 121.	0.859
ligT	ybdJ	STM0188	STM0582	2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	0.722
ligT	ybdK	STM0188	STM0583	2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	Putative cytoplasmic protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.	0.851
ybaM	ybdJ	STM0480	STM0582	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73568.1); Blastp hit to AAC73568.1 (53 aa), 80% identity in aa 1 - 49.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	0.747
ybaM	ydbL	STM0480	STM1644	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73568.1); Blastp hit to AAC73568.1 (53 aa), 80% identity in aa 1 - 49.	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74465.1); Blastp hit to AAC74465.1 (110 aa), 70% identity in aa 3 - 109.	0.856
ybaM	ynfA	STM0480	STM1504	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73568.1); Blastp hit to AAC73568.1 (53 aa), 80% identity in aa 1 - 49.	Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74654.1); Blastp hit to AAC74654.1 (108 aa), 88% identity in aa 1 - 108.	0.726
ybaM	yniB	STM0480	STM1323	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73568.1); Blastp hit to AAC73568.1 (53 aa), 80% identity in aa 1 - 49.	Putative regulator; Similar to E. coli orf, hypothetical protein (AAC74796.1); Blastp hit to AAC74796.1 (178 aa), 83% identity in aa 1 - 178.	0.856
ybdF	ligT	STM0579	STM0188	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73680.1); Blastp hit to AAC73680.1 (122 aa), 75% identity in aa 1 - 121.	2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	0.859
ybdF	ybdJ	STM0579	STM0582	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73680.1); Blastp hit to AAC73680.1 (122 aa), 75% identity in aa 1 - 121.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	0.852
ybdF	ybdK	STM0579	STM0583	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73680.1); Blastp hit to AAC73680.1 (122 aa), 75% identity in aa 1 - 121.	Putative cytoplasmic protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.	0.895
ybdJ	ligT	STM0582	STM0188	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.	0.722
ybdJ	ybaM	STM0582	STM0480	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73568.1); Blastp hit to AAC73568.1 (53 aa), 80% identity in aa 1 - 49.	0.747
ybdJ	ybdF	STM0582	STM0579	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative cytoplasmic protein; Similar to E. coli orf, hypothetical protein (AAC73680.1); Blastp hit to AAC73680.1 (122 aa), 75% identity in aa 1 - 121.	0.852
ybdJ	ybdK	STM0582	STM0583	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative cytoplasmic protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.	0.886
ybdJ	ydbL	STM0582	STM1644	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative periplasmic protein; Similar to E. coli orf, hypothetical protein (AAC74465.1); Blastp hit to AAC74465.1 (110 aa), 70% identity in aa 3 - 109.	0.726
ybdJ	ydhK	STM0582	STM1441	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC74717.1); Blastp hit to AAC74717.1 (670 aa), 84% identity in aa 1 - 669.	0.723
ybdJ	yfjD	STM0582	STM2679	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Similar to E. coli putative transport protein (AAC75662.1); Blastp hit to AAC75662.1 (227 aa), 94% identity in aa 1 - 227.	0.680
ybdJ	ynaJ	STM0582	STM1662	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC74414.1); Blastp hit to AAC74414.1 (85 aa), 88% identity in aa 1 - 84.	0.754
ybdJ	ynfA	STM0582	STM1504	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative inner membrane lipoprotein; Similar to E. coli orf, hypothetical protein (AAC74654.1); Blastp hit to AAC74654.1 (108 aa), 88% identity in aa 1 - 108.	0.649
ybdJ	yniB	STM0582	STM1323	Putative inner membrane protein; Similar to E. coli orf, hypothetical protein (AAC73681.1); Blastp hit to AAC73681.1 (82 aa), 85% identity in aa 1 - 82.	Putative regulator; Similar to E. coli orf, hypothetical protein (AAC74796.1); Blastp hit to AAC74796.1 (178 aa), 83% identity in aa 1 - 178.	0.726

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