ybdQ protein (Salmonella enterica Typhimurium)

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ybdQ

Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142. (142 aa)

Predicted Functional Partners:

ydaA

0.974

yecG

0.939

uspA

0.910

uspB

0.606

ynaF

0.544

ybdR

0.501

ybiP

0.476

yghA

0.450

yfiA

0.444

rna

0.443

Your Current Organism:

Salmonella enterica Typhimurium

NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rna	ybdQ	STM0617	STM0614	Similar to E. coli RNase I, cleaves phosphodiester bond between any two nucleotides (AAC73712.1); Blastp hit to AAC73712.1 (268 aa), 73% identity in aa 1 - 268; Belongs to the RNase T2 family.	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	0.443
uspA	uspB	STM3591	STM3590	Universal stress protein A; Required for resistance to DNA-damaging agents.	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	0.932
uspA	ybdQ	STM3591	STM0614	Universal stress protein A; Required for resistance to DNA-damaging agents.	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	0.910
uspA	ydaA	STM3591	STM1661	Universal stress protein A; Required for resistance to DNA-damaging agents.	Putative universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.	0.961
uspA	yfiA	STM3591	STM2665	Universal stress protein A; Required for resistance to DNA-damaging agents.	Ribosome associated factor; Stabilizes ribosomes against dissociation; similar to E. coli putative yhbH sigma 54 modulator (AAC75646.1); Blastp hit to AAC75646.1 (113 aa), 91% identity in aa 1 - 112.	0.723
uspA	ynaF	STM3591	STM1652	Universal stress protein A; Required for resistance to DNA-damaging agents.	Similar to E. coli putative filament protein (AAC74458.1); Blastp hit to AAC74458.1 (168 aa), 90% identity in aa 25 - 168.	0.913
uspB	uspA	STM3590	STM3591	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	Universal stress protein A; Required for resistance to DNA-damaging agents.	0.932
uspB	ybdQ	STM3590	STM0614	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	0.606
uspB	ydaA	STM3590	STM1661	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	Putative universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.	0.782
uspB	yecG	STM3590	STM1927	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	Putative universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.	0.723
uspB	ynaF	STM3590	STM1652	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	Similar to E. coli putative filament protein (AAC74458.1); Blastp hit to AAC74458.1 (168 aa), 90% identity in aa 25 - 168.	0.752
ybdQ	rna	STM0614	STM0617	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Similar to E. coli RNase I, cleaves phosphodiester bond between any two nucleotides (AAC73712.1); Blastp hit to AAC73712.1 (268 aa), 73% identity in aa 1 - 268; Belongs to the RNase T2 family.	0.443
ybdQ	uspA	STM0614	STM3591	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Universal stress protein A; Required for resistance to DNA-damaging agents.	0.910
ybdQ	uspB	STM0614	STM3590	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Universal stress protein B; Involved in stationary-phase resistance to ethanol; similar to E. coli orf, hypothetical protein (AAC76519.1); Blastp hit to AAC76519.1 (111 aa), 95% identity in aa 1 - 111.	0.606
ybdQ	ybdR	STM0614	STM0615	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Similar to E. coli putative oxidoreductase (AAC73709.1); Blastp hit to AAC73709.1 (412 aa), 91% identity in aa 1 - 412.	0.501
ybdQ	ybiP	STM0614	STM0834	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Putative integral membrane protein; Similar to E. coli putative enzyme (AAC73902.1); Blastp hit to AAC73902.1 (527 aa), 84% identity in aa 1 - 526.	0.476
ybdQ	ydaA	STM0614	STM1661	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Putative universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.	0.974
ybdQ	yecG	STM0614	STM1927	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Putative universal stress protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.	0.939
ybdQ	yfiA	STM0614	STM2665	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Ribosome associated factor; Stabilizes ribosomes against dissociation; similar to E. coli putative yhbH sigma 54 modulator (AAC75646.1); Blastp hit to AAC75646.1 (113 aa), 91% identity in aa 1 - 112.	0.444
ybdQ	yghA	STM0614	STM3157	Putative universal stress protein UspA and related nucleotide-binding protein; Similar to E. coli orf, hypothetical protein (AAC73708.1); Blastp hit to AAC73708.1 (142 aa), 89% identity in aa 1 - 142.	Similar to E. coli putative oxidoreductase (AAC76039.1); Blastp hit to AAC76039.1 (294 aa), 93% identity in aa 1 - 294.	0.450

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