STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM0723Putative ABC-type polysaccharide/polyol phosphate transport system, ATPase component; Similar to E. coli ATP-binding component of putrescine transport system (AAC73942.1); Blastp hit to AAC73942.1 (404 aa), 28% identity in aa 61 - 259. (236 aa)    
Predicted Functional Partners:
STM0722
Putative ABC transporter permease protein.
 
 0.999
STM0765
Putative cation transporter; Similar to E. coli putative transport protein (AAC75352.1); Blastp hit to AAC75352.1 (610 aa), 31% identity in aa 9 - 193, 27% identity in aa 413 - 610, 27% identity in aa 425 - 594, 24% identity in aa 6 - 196.
   
  
 0.899
STM1635
Putative ABC-type polar amino acid transport system; ATPase component; similar to E. coli putative ATP-binding component of a transport system (AAC76303.1); Blastp hit to AAC76303.1 (252 aa), 42% identity in aa 11 - 230.
      
 0.898
STM0719
Similar to E. coli UDP-galactopyranose mutase (AAC75097.1); Blastp hit to AAC75097.1 (367 aa), 39% identity in aa 5 - 366.
 
  
 0.873
STM0724
Putative glycosyltransferase, cell wall biogenesis.
 
  
 0.869
STM0721
Putative glycosyl transferase; Similar to E. coli putative colanic acid biosynthesis glycosyl transferase (AAC75105.1); Blastp hit to AAC75105.1 (406 aa), 25% identity in aa 199 - 399.
  
 
 0.858
wza
Putative polysaccharide export protein; Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium.
  
  
 0.835
ybaL
Similar to E. coli putative transport protein (AAC73580.1); Blastp hit to AAC73580.1 (558 aa), 94% identity in aa 1 - 556; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
      
 0.834
mglC
Methyl-galactoside transport protein; Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane.
      
 0.834
STM0720
Putative glycosyl transferase.
 
  
 0.797
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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