STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM0897Fels-1 prophage protein. (138 aa)    
Predicted Functional Partners:
STM0896
Fels-1 prophage protein.
   
  
 0.974
STM0899
Fels-1 prophage protein.
   
    0.682
STM0894
Putative Fels-1 prophage excisionase.
   
    0.674
STM0920
Fels-1 prophage attachment and invasion protein; Ail and ompX homolog (gi|2232362).
   
    0.655
STM0904
Fels-1 prophage protein.
   
    0.627
STM0919
Putative Fels-1 prophage minor tail protein; Lambda phage M tail component homolog (gi|2232363).
   
    0.594
STM0898
Predicted Fels-1 prophage transcriptional regulator.
   
    0.588
STM0905
Similar to E. coli orf, hypothetical protein (AAC74261.1); Blastp hit to AAC74261.1 (122 aa), 48% identity in aa 3 - 118.
   
    0.588
STM0913
Fels-1 prophage protein.
   
    0.478
STM0921
Putative Fels-1 prophage minor tail protein.
   
    0.459
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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