STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
STM0899Fels-1 prophage protein. (122 aa)    
Predicted Functional Partners:
STM0900
Putative Fels-1 prophage DNA or RNA helicases of superfamily II; Similar to E. coli putative ATP-dependent helicase (AAC75245.1); Blastp hit to AAC75245.1 (586 aa), 29% identity in aa 124 - 378, 25% identity in aa 20 - 158.
  
    0.993
STM0902
Fels-1 prophage protein.
  
    0.978
STM0903
Putative Fels-1 prophage chaparone; Similar to E. coli orf, hypothetical protein (AAC74632.1); Blastp hit to AAC74632.1 (260 aa), 38% identity in aa 11 - 130, 37% identity in aa 152 - 259, 35% identity in aa 121 - 165, 58% identity in aa 123 - 134, 40-1073758628dentity in aa 168 - 187.
  
    0.978
STM0919
Putative Fels-1 prophage minor tail protein; Lambda phage M tail component homolog (gi|2232363).
   
    0.978
STM0898
Predicted Fels-1 prophage transcriptional regulator.
   
    0.974
STM0913
Fels-1 prophage protein.
   
    0.961
STM0921
Putative Fels-1 prophage minor tail protein.
   
    0.959
STM0918
Putative Fels-1 prophage minor tail protein; Lambda phage H tail component homolog (gi|2232364).
   
    0.953
STM0894
Putative Fels-1 prophage excisionase.
   
    0.950
STM0910
Fels-1 prophage protein.
   
    0.939
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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