close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM0905Similar to E. coli orf, hypothetical protein (AAC74261.1); Blastp hit to AAC74261.1 (122 aa), 48% identity in aa 3 - 118. (132 aa)    
Predicted Functional Partners:
STM0903
Putative Fels-1 prophage chaparone; Similar to E. coli orf, hypothetical protein (AAC74632.1); Blastp hit to AAC74632.1 (260 aa), 38% identity in aa 11 - 130, 37% identity in aa 152 - 259, 35% identity in aa 121 - 165, 58% identity in aa 123 - 134, 40-1073758628dentity in aa 168 - 187.
   
    0.869
STM0920
Fels-1 prophage attachment and invasion protein; Ail and ompX homolog (gi|2232362).
   
    0.856
STM0913
Fels-1 prophage protein.
   
    0.854
STM0921
Putative Fels-1 prophage minor tail protein.
   
    0.822
STM0898
Predicted Fels-1 prophage transcriptional regulator.
   
    0.788
STM0919
Putative Fels-1 prophage minor tail protein; Lambda phage M tail component homolog (gi|2232363).
   
    0.751
STM0918
Putative Fels-1 prophage minor tail protein; Lambda phage H tail component homolog (gi|2232364).
   
    0.745
STM0896
Fels-1 prophage protein.
   
    0.741
STM0900
Putative Fels-1 prophage DNA or RNA helicases of superfamily II; Similar to E. coli putative ATP-dependent helicase (AAC75245.1); Blastp hit to AAC75245.1 (586 aa), 29% identity in aa 124 - 378, 25% identity in aa 20 - 158.
   
    0.738
STM0914
Putative Fels-1 phage tail component.
   
    0.712
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.