Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
STM1015Gifsy-2 prophage ATPase involved in DNA replication initiation; dnaC protein homolog (gi|7443681). (249 aa)    
Predicted Functional Partners:
STM1029
Gifsy-2 prophage protein; Bacteriophage ES18 gp15 protein (gi|1143595).
      
 0.953
STM2239
Similar to antiterminator protein Q of phage P5; similar to E. coli orf, hypothetical protein (AAC73652.1); Blastp hit to AAC73652.1 (127 aa), 47% identity in aa 1 - 121.
      
 0.920
ydiN
Similar to E. coli putative amino acid/amine transport protein (AAC74761.1); Blastp hit to AAC74761.1 (423 aa), 85% identity in aa 3 - 412.
      
 0.896
dnaB
Putative replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.
 
 0.861
STM1014
Gifsy-2 prophage putative regulatory protein; Probable replication protein (gi|7467283).
 
  
 0.846
STM1016
Gifsy-2 prophage protein; Hypothetical protein (gi|7467246).
  
    0.787
STM1017
Gifsy-2 prophage protein; Hypothetical protein 11 (gi|7467260).
  
    0.782
STM1013
Gifsy-2 prophage putative regulatory protein; Probable regulatory protein (gi|7467282).
  
    0.560
STM1018
Gifsy-2 prophage protein; Hypothetical protein 11 (gi|7467261).
       0.558
yecA
Putative metal-binding protein; Similar to the C-terminal domain of SecA; similar to E. coli orf, hypothetical protein (AAC74978.1); Blastp hit to AAC74978.1 (221 aa), 81% identity in aa 1 - 221; Belongs to the UPF0149 family.
  
     0.534
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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