STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM1018Gifsy-2 prophage protein; Hypothetical protein 11 (gi|7467261). (96 aa)    
Predicted Functional Partners:
STM1014
Gifsy-2 prophage putative regulatory protein; Probable replication protein (gi|7467283).
  
    0.561
STM1017
Gifsy-2 prophage protein; Hypothetical protein 11 (gi|7467260).
  
    0.561
STM1016
Gifsy-2 prophage protein; Hypothetical protein (gi|7467246).
  
    0.560
STM1015
Gifsy-2 prophage ATPase involved in DNA replication initiation; dnaC protein homolog (gi|7443681).
       0.558
STM1013
Gifsy-2 prophage putative regulatory protein; Probable regulatory protein (gi|7467282).
  
    0.417
STM1019
Gifsy-2 prophage protein; Hypothetical protein 13 (gi|7467262).
       0.410
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.