STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STM1042Gifsy-2 prophage probable minor tail protein; Lambda phage M tail component homolog (gi|2232363). (110 aa)    
Predicted Functional Partners:
STM1041
Gifsy-2 prophage probable minor tail protein; Lambda phage H tail component homolog (gi|2232364).
  
    0.928
STM1036
Gifsy-2 prophage probable minor tail protein.
  
    0.838
STM1035
Gifsy-2 prophage ATP-binding sugar transporter-like protein.
  
    0.835
STM1038
Gifsy-2 prophage probable major tail protein.
  
    0.830
STM1033
Gifsy-2 prophage Clp protease-like protein; Similar to E. coli ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (AAC73540.1); Blastp hit to AAC73540.1 (207 aa), 29% identity in aa 73 - 203; Belongs to the peptidase S14 family.
  
    0.792
STM1032
Gifsy-2 prophage protein.
  
    0.786
STM1039
Gifsy-2 prophage probable minor tail protein.
  
    0.754
STM1046
Gifsy-2 prophage probable tail assembly protein.
  
  
 0.743
STM1040
Gifsy-2 prophage probable minor tail protein.
  
    0.710
STM1034
Gifsy-2 prophage putative RecA/RadA recombinase.
  
    0.708
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.