Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
STM1046Gifsy-2 prophage probable tail assembly protein. (245 aa)    
Predicted Functional Partners:
STM1045
Gifsy-2 prophage probable minor tail protein; Lambda phage L tail component homolog (gi|2232360).
 
  
 0.944
STM1047
Gifsy-2 prophage probable tail assembly protein.
 
    0.932
STM1048
Gifsy-2 prophage host specificity protein J, phage lambda.
  
    0.797
STM1042
Gifsy-2 prophage probable minor tail protein; Lambda phage M tail component homolog (gi|2232363).
  
  
 0.785
STM0919
Putative Fels-1 prophage minor tail protein; Lambda phage M tail component homolog (gi|2232363).
  
  
 0.744
STM2593
Gifsy-1 prophage protein; Similar to phage tail component M; lambda phage M tail component homolog (gi|2232363).
  
  
 0.744
STM1869A
Hypothetical protein.
  
    0.712
STM0921
Putative Fels-1 prophage minor tail protein.
  
  
 0.667
STM2592
Gifsy-1 prophage protein; Similar to phage tail component L.
  
  
 0.667
STM1037
Gifsy-2 prophage probable minor tail protein.
   
    0.666
Your Current Organism:
Salmonella enterica Typhimurium
NCBI taxonomy Id: 99287
Other names: S. enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium LT2, Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2, Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2, Salmonella typhimurium LT2
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